Publications

Refereed book chapter

Campbell BJ. 2014. The Acidobacteriaceae. In: The Prokaryotes. Ed. Ed Delong, Eugene Rosenberg, Erko Stackebrand, Fabiano Thompson, Stephen Lory; publisher: Springer.

Refereed journal articles

Powers L, Luek J, Schmitt-Kopplin P, Campbell BJ, Cooper L, Magen C, and Gonsior M. 2018. Seasonal changes in dissolved organic matter composition in Delaware Bay in March and August 2014. Organic Geochemistry. 122:87-97. doi.org/10.1016/j.orggeochem.2018.05.005.

Maresca JA, Miller KJ, Keffer JL, Sabanayagam CR, and Campbell BJ. 2018. Distribution and diversity of rhodopsin-producing microbes in the Chesapeake Bay. Accepted manuscript posted online 27 April 2018, doi: 10.1128/AEM.00137-18 (includes cover photo July 2018).

Waite, DW, Wanwonterghen I, Rinke C, Parks DH, Zhang Y, Takai K, Wievert SM, Simon J, Campbell BJ, Hanson TE, Woyke T, Klotz MG, Hugenholtz P. 2017. Comparative genomic analysis of the class Epsilonproteobacteria and proposed reclassification to Epsilonbactereraeota (phyl. nov.). Front. Microbiol. doi: 10.3389/fmicb.2017.00682.

Paez-Espino, D, Chen, I-M, Palaniappan, K, Ratner, A, Chu, K, Szeto, E, Pillay, M, Huang, J, Markowitz, V, Nielsen, T, Huntemann, M, Reddy, T.B.K.; Pavlopoulos, G, Sullivan, M, Campbell, B, McMahon, K, Hallam, S, Denef, V, Cavicchioli, R, Caffrey, S, Streit, W, Webster, J, Handley, K, Salekdeh, G, Tsesmetzis, N, Satubal, J, Pope, P, Liu, W, Rivers, A, Ivanova, N, and Kyrpides, N. 2017. IMG/VR: A comprehensive database of cultured and uncultured DNA Viruses and Retroviruses. Nucleic Acids Research. 45 (D1): D457-D465. doi: 10.1093/nar/gkw1030.

Rossmassler K, Hanson TE and Campbell BJ. 2016. Diverse sulfur metabolisms from two subterranean sulfidic spring systems. FEMS Microbiology Letters, Aug; 363(16).

Campbell BJ, Polson SW, Allen, LZ, Williamson, SJ, Lee CK, Wommack KE, and Cary SC. 2013. Differential diversity and composition of microbial communities between basalt- and sediment-based hydrothermal vent spreading centers. Frontiers in Extreme Microbiology 4: 182.

Hanson TE, Campbell BJ, Kalis, KT, Campbell M, and Klotz MG. 2013. Nitrate ammonification by Nautilia profundicola AmH: experimental evidence consistent with a free hydroxylamine intermediate. Frontiers in Evolutionary and Genomic Microbiology 4: 180.

Campbell BJ and Kirchman DL. 2013. Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient. ISME Journal 4: 210-220.

Rossmassler K, Engel A, Twing KI, Hanson TE, and Campbell BJ. 2011. Drivers of Epsilonproteobacteria community composition in sulfidic caves and springs. FEMS Microbiol Ecol. 79:421-432.

Campbell BJ, Yu L, Heidelberg J, and Kirchman DL. 2011. Activity of abundant and rare bacteria in a coastal ocean. Proceedings of the National Academy of Sciences USA. 108:12776-12781.

Twing K, Kirchman DL and Campbell BJ. 2011. Temporal study of Helicobacter pylori presence in coastal freshwater, estuary and marine waters. Water Research, 45:1897-1905.

Campbell BJ, Paulson SW, Hanson TE, Mack MC, and Schuur EAG. 2010. The effect of nutrient deposition on bacterial communities in Arctic tundra soil. Environmental Microbiology, 12:1842-1854.

Campbell BJ, Yu, L, Straza, TRA, Kirchman, DL. 2009. Temporal changes in bacterial rRNA and rRNA genes in Delaware (USA) coastal waters. Aquatic Microbial Ecology, 57:123-135.

Lami R, Cottrell MT, Campbell BJ, and DL Kirchman. 2009. Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters. Environmental Microbiology, 11:3201-3209.

Campbell BJ, Smith JL, Hanson TE, Klotz MG, Stein LY, Lee CK, Wu D, Robinson JM, Khouri HM, Eisen JA, and Cary SC. 2009. Adaptations to submarine hydrothermal environments exemplified by the genome of Nautilia profundicola. PLoS Genetics, 5:e1000362.

Grzymski JJ, Murray AE, Campbell BJ, Kaplarevic M, Gao GR, Lee C, Daniel R, Ghadiri A, Feldman RA, and Cary SC. 2008. Metagenome analysis of an extreme microbial symbiosis reveals eurythermal adaptation and metabolic flexibility. Proceedings of the National Academy of Sciences USA, 105:17516-17521.

Smith JL, Campbell BJ, Hanson TE, Zhang CL and Cary SC. 2008. Nautilia profundicola sp. nov., a thermophilic sulfur-reducing episolonproteobacterium from deep-sea hydrothermal vents. International Journal of Systematic and Evolutionary Microbiology, 58:1598-1602.

Campbell BJ, Waidner LA, Cottrell MT, and Kirchman DL. 2008. Abundant proteorhodopsin genes in the North Atlantic Ocean. Environmental Microbiology, 10:99-109.

Campbell BJ, Engel AS, Porter ML and Takai K. 2006. The versatile ε-proteobacteria: key players in sulphidic habitats. Nature Reviews Microbiology, 4:458-468.

Takai K, Campbell BJ, Cary SC, Suzuki M, Oida H, Nunoura T, Hirayama H, Nakagawa S, Suzuki Y, Inagaki F, and Horikoshi K. Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of Epsilonproteobacteria. 2005. Applied and Environmental Microbiology, 71:7310-7320.

Campbell BJ, and Cary SC. Abundance of reverse tricarboxylic acid cycle genes in free-living microorganisms at deep-sea hydrothermal vents. 2004. Applied and Environmental Microbiology, 70:6282-6289.

Campbell BJ, Stein JV, and Cary SC. Evidence of chemolithoautotrophy in the bacterial community associated with Alvinella pompejana, a hydrothermal vent polychaete. 2003. Applied and Environmental Microbiology, 69:5070-5078.

Cary SC, Campbell BJ, and DeLong, EF. Studying the deep subsurface biosphere: emerging technologies and applications. 2004. Ed. WSD Wilcock, EF DeLong, DS Kelley, JA Baross, SC Cary. Geophysical Monograph Series, 144: 383-399.

Hutchins DA, Campbell BJ, Cottrell MT, Takeda S, and Cary SC. Response of marine bacterial community composition to iron additions in three iron-limited regimes. 2001. Limnology and Oceanography, 46:1535-1545.

Campbell BJ, Jeanthon C, Kostka JE, Luther GWIII, and Cary SC. Growth and phylogenetic properties of novel bacteria belonging to the epsilon subdivision of the Proteobacteria enriched from Alvinella pompejana and deep-sea hydrothermal vents. 2001. Applied and Environmental Microbiology, 67:4566-4572.

Slobodkin A, Campbell B, Cary SC, Bonch-Osmolovskaya E, and Jeanthon C. Evidence for the presence of thermophilicFe(III)-reducing microorganisms in deep-sea hydrothermal vents at 13º N (East Pacific Rise). 2001. FEMS Microbiology Ecology, 36:235-243.

Campbell BJ, and Cary SC. Characterization of a novel spirochete associated with the hydrothermal vent polychaete annelid, Alvinella pompejana. 2001. Applied and Environmental Microbiology, 67:110-117.

Beer BE, Bailes E, Dapolito G, Campbell BJ, Goeken RM, Axthelm MK, Markham PD, Bernard J, Zagury D, Franchini G, Sharp PM, and Hirsch VM. Patterns of genomic sequence diversity among their simian immunodeficiency viruses suggest that L'Hoest monkeys (Cercopithecusl hoesti) are a natural lentivirus reservoir. 2000. Journal of Virology, 74:3892-3898.

Hirsch VM, Campbell BJ, Bailes, E, Goeken R, Brown, C, Elkins WR, Axthelm M, Murphey-Corb, M, and Sharp PM. Characterization of a novel simian immunodeficiency virus (SIV) from l’hoest monkeys (Cercopithecusl’hoesti): implications for the origins of SIVmnd and other primate lentiviruses. 1999. Journal of Virology, 73:1036-1045.

Campbell BJ, and Hirsch VM. Vpr of simian immunodeficiency virus of African green monkeys is required for replication in macaque macrophages and lymphocytes. 1997. Journal of Virology, 71:5593-5602.

Hirsch V, Adger-Johnson D, Campbell B, Goldstein S, Brown C, Elkins WR, and Montefiori DC. A molecularly cloned, pathogenic, neutralization resistant simian immunodeficiency virus, SIVsmE543-3. 1997. Journal of Virology, 71:1608-1620.

Campbell BJ, and Avery RJ. Sequence analysis and transcriptional activity of the LTR of OLV-CU1, a North American ovine lentivirus. 1996. Journal of General Virology, 77:2999-3004.

Hirsch VM, Dapolito G, Goeken R, and Campbell BJ. Phylogeny and natural history of the primate lentiviruses, SIV and HIV. 1995. Current Opinion in Genetics & Development, 5:798-806.

Campbell BJ, and Hirsch VM. Extensive envelope heterogeneity of simian immunodeficiency virus in tissues from infected macaques. 1994. Journal of Virology, 68:3129-3137.

Campbell BJ, Thompson DR, Williams JR, Campbell SG, and Avery RJ. Characterization of a New York ovine lentivirus isolate. 1993. Journal of General Virology, 74:201-210.

The Campbell lab

Molecular Microbial Ecology

Publications

Refereed book chapter

Campbell BJ. 2014. The Acidobacteriaceae. In: The Prokaryotes. Ed. Ed Delong, Eugene Rosenberg, Erko Stackebrand, Fabiano Thompson, Stephen Lory; publisher: Springer.

Refereed journal articles

Campbell BJ, Polson SW, Allen, LZ, Williamson, SJ, Lee CK, Wommack KE, and Cary SC. 2013. Differential diversity and composition of microbial communities between basalt- and sediment-based hydrothermal vent spreading centers. Frontiers in Extreme Microbiology 4: 182.

Hanson TE, Campbell BJ, Kalis, KT, Campbell M, and Klotz MG. 2013. Nitrate ammonification by Nautilia profundicola AmH: experimental evidence consistent with a free hydroxylamine intermediate. Frontiers in Evolutionary and Genomic Microbiology 4: 180.

Campbell BJ and Kirchman DL. 2013. Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient. ISME Journal 4: 210-220.

Rossmassler K, Engel A, Twing KI, Hanson TE, and Campbell BJ. 2011. Drivers of Epsilonproteobacteria community composition in sulfidic caves and springs. FEMS Microbiol Ecol. 79:421-432.

Campbell BJ, Yu L, Heidelberg J, and Kirchman DL. 2011. Activity of abundant and rare bacteria in a coastal ocean. Proceedings of the National Academy of Sciences USA. 108:12776-12781.

Twing K, Kirchman DL and Campbell BJ. 2011. Temporal study of Helicobacter pylori presence in coastal freshwater, estuary and marine waters. Water Research, 45:1897-1905.

Campbell BJ, Paulson SW, Hanson TE, Mack MC, and Schuur EAG. 2010. The effect of nutrient deposition on bacterial communities in Arctic tundra soil. Environmental Microbiology, 12:1842-1854.

Campbell BJ, Yu, L, Straza, TRA, Kirchman, DL. 2009. Temporal changes in bacterial rRNA and rRNA genes in Delaware (USA) coastal waters. Aquatic Microbial Ecology, 57:123-135.

Lami R, Cottrell MT, Campbell BJ, and DL Kirchman. 2009. Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters. Environmental Microbiology, 11:3201-3209.

Campbell BJ, Smith JL, Hanson TE, Klotz MG, Stein LY, Lee CK, Wu D, Robinson JM, Khouri HM, Eisen JA, and Cary SC. 2009. Adaptations to submarine hydrothermal environments exemplified by the genome of Nautilia profundicola. PLoS Genetics, 5:e1000362.

Grzymski JJ, Murray AE, Campbell BJ, Kaplarevic M, Gao GR, Lee C, Daniel R, Ghadiri A, Feldman RA, and Cary SC. 2008. Metagenome analysis of an extreme microbial symbiosis reveals eurythermal adaptation and metabolic flexibility. Proceedings of the National Academy of Sciences USA, 105:17516-17521.

Smith JL, Campbell BJ, Hanson TE, Zhang CL and Cary SC. 2008. Nautilia profundicola sp. nov., a thermophilic sulfur-reducing episolonproteobacterium from deep-sea hydrothermal vents. International Journal of Systematic and Evolutionary Microbiology, 58:1598-1602.

Campbell BJ, Waidner LA, Cottrell MT, and Kirchman DL. 2008. Abundant proteorhodopsin genes in the North Atlantic Ocean. Environmental Microbiology, 10:99-109.

Campbell BJ, Engel AS, Porter ML and Takai K. 2006. The versatile ε-proteobacteria: key players in sulphidic habitats. Nature Reviews Microbiology, 4:458-468.

Campbell BJ, and Cary SC. Abundance of reverse tricarboxylic acid cycle genes in free-living microorganisms at deep-sea hydrothermal vents. 2004. Applied and Environmental Microbiology, 70:6282-6289.

Campbell BJ, Stein JV, and Cary SC. Evidence of chemolithoautotrophy in the bacterial community associated with Alvinella pompejana, a hydrothermal vent polychaete. 2003. Applied and Environmental Microbiology, 69:5070-5078.

Cary SC, Campbell BJ, and DeLong, EF. Studying the deep subsurface biosphere: emerging technologies and applications. 2004. Ed. WSD Wilcock, EF DeLong, DS Kelley, JA Baross, SC Cary. Geophysical Monograph Series, 144: 383-399.

Hutchins DA, Campbell BJ, Cottrell MT, Takeda S, and Cary SC. Response of marine bacterial community composition to iron additions in three iron-limited regimes. 2001. Limnology and Oceanography, 46:1535-1545.

Slobodkin A, Campbell B, Cary SC, Bonch-Osmolovskaya E, and Jeanthon C. Evidence for the presence of thermophilicFe(III)-reducing microorganisms in deep-sea hydrothermal vents at 13º N (East Pacific Rise). 2001. FEMS Microbiology Ecology, 36:235-243.

Campbell BJ, and Cary SC. Characterization of a novel spirochete associated with the hydrothermal vent polychaete annelid, Alvinella pompejana. 2001. Applied and Environmental Microbiology, 67:110-117.

Campbell BJ, and Hirsch VM. Vpr of simian immunodeficiency virus of African green monkeys is required for replication in macaque macrophages and lymphocytes. 1997. Journal of Virology, 71:5593-5602.

Hirsch V, Adger-Johnson D, Campbell B, Goldstein S, Brown C, Elkins WR, and Montefiori DC. A molecularly cloned, pathogenic, neutralization resistant simian immunodeficiency virus, SIVsmE543-3. 1997. Journal of Virology, 71:1608-1620.

Campbell BJ, and Avery RJ. Sequence analysis and transcriptional activity of the LTR of OLV-CU1, a North American ovine lentivirus. 1996. Journal of General Virology, 77:2999-3004.

Hirsch VM, Dapolito G, Goeken R, and Campbell BJ. Phylogeny and natural history of the primate lentiviruses, SIV and HIV. 1995. Current Opinion in Genetics & Development, 5:798-806.

Campbell BJ, and Hirsch VM. Extensive envelope heterogeneity of simian immunodeficiency virus in tissues from infected macaques. 1994. Journal of Virology, 68:3129-3137.

Campbell BJ, Thompson DR, Williams JR, Campbell SG, and Avery RJ. Characterization of a New York ovine lentivirus isolate. 1993. Journal of General Virology, 74:201-210.

Publications

Refereed book chapter

Campbell BJ. 2014. The Acidobacteriaceae. In: The Prokaryotes. Ed. Ed Delong, Eugene Rosenberg, Erko Stackebrand, Fabiano Thompson, Stephen Lory; publisher: Springer.

Refereed journal articles

​

​

​

Campbell BJ, Polson SW, Allen, LZ, Williamson, SJ, Lee CK, Wommack KE, and Cary SC. 2013. Differential diversity and composition of microbial communities between basalt- and sediment-based hydrothermal vent spreading centers. Frontiers in Extreme Microbiology 4: 182.

Hanson TE, Campbell BJ, Kalis, KT, Campbell M, and Klotz MG. 2013. Nitrate ammonification by Nautilia profundicola AmH: experimental evidence consistent with a free hydroxylamine intermediate. Frontiers in Evolutionary and Genomic Microbiology 4: 180.

Campbell BJ and Kirchman DL. 2013. Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient. ISME Journal 4: 210-220.

Rossmassler K, Engel A, Twing KI, Hanson TE, and Campbell BJ. 2011. Drivers of Epsilonproteobacteria community composition in sulfidic caves and springs. FEMS Microbiol Ecol. 79:421-432.

Campbell BJ, Yu L, Heidelberg J, and Kirchman DL. 2011. Activity of abundant and rare bacteria in a coastal ocean. Proceedings of the National Academy of Sciences USA. 108:12776-12781.

Twing K, Kirchman DL and Campbell BJ. 2011. Temporal study of Helicobacter pylori presence in coastal freshwater, estuary and marine waters. Water Research, 45:1897-1905.

Campbell BJ, Paulson SW, Hanson TE, Mack MC, and Schuur EAG. 2010. The effect of nutrient deposition on bacterial communities in Arctic tundra soil. Environmental Microbiology, 12:1842-1854.

Campbell BJ, Yu, L, Straza, TRA, Kirchman, DL. 2009. Temporal changes in bacterial rRNA and rRNA genes in Delaware (USA) coastal waters. Aquatic Microbial Ecology, 57:123-135.

Lami R, Cottrell MT, Campbell BJ, and DL Kirchman. 2009. Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters. Environmental Microbiology, 11:3201-3209.

Campbell BJ, Smith JL, Hanson TE, Klotz MG, Stein LY, Lee CK, Wu D, Robinson JM, Khouri HM, Eisen JA, and Cary SC. 2009. Adaptations to submarine hydrothermal environments exemplified by the genome of Nautilia profundicola. PLoS Genetics, 5:e1000362.

Grzymski JJ, Murray AE, Campbell BJ, Kaplarevic M, Gao GR, Lee C, Daniel R, Ghadiri A, Feldman RA, and Cary SC. 2008. Metagenome analysis of an extreme microbial symbiosis reveals eurythermal adaptation and metabolic flexibility. Proceedings of the National Academy of Sciences USA, 105:17516-17521.

Smith JL, Campbell BJ, Hanson TE, Zhang CL and Cary SC. 2008. Nautilia profundicola sp. nov., a thermophilic sulfur-reducing episolonproteobacterium from deep-sea hydrothermal vents. International Journal of Systematic and Evolutionary Microbiology, 58:1598-1602.

Campbell BJ, Waidner LA, Cottrell MT, and Kirchman DL. 2008. Abundant proteorhodopsin genes in the North Atlantic Ocean. Environmental Microbiology, 10:99-109.

Campbell BJ, Engel AS, Porter ML and Takai K. 2006. The versatile ε-proteobacteria: key players in sulphidic habitats. Nature Reviews Microbiology, 4:458-468.

Campbell BJ, and Cary SC. Abundance of reverse tricarboxylic acid cycle genes in free-living microorganisms at deep-sea hydrothermal vents. 2004. Applied and Environmental Microbiology, 70:6282-6289.

Campbell BJ, Stein JV, and Cary SC. Evidence of chemolithoautotrophy in the bacterial community associated with Alvinella pompejana, a hydrothermal vent polychaete. 2003. Applied and Environmental Microbiology, 69:5070-5078.

Cary SC, Campbell BJ, and DeLong, EF. Studying the deep subsurface biosphere: emerging technologies and applications. 2004. Ed. WSD Wilcock, EF DeLong, DS Kelley, JA Baross, SC Cary. Geophysical Monograph Series, 144: 383-399.

Hutchins DA, Campbell BJ, Cottrell MT, Takeda S, and Cary SC. Response of marine bacterial community composition to iron additions in three iron-limited regimes. 2001. Limnology and Oceanography, 46:1535-1545.

Slobodkin A, Campbell B, Cary SC, Bonch-Osmolovskaya E, and Jeanthon C. Evidence for the presence of thermophilicFe(III)-reducing microorganisms in deep-sea hydrothermal vents at 13º N (East Pacific Rise). 2001. FEMS Microbiology Ecology, 36:235-243.

Campbell BJ, and Cary SC. Characterization of a novel spirochete associated with the hydrothermal vent polychaete annelid, Alvinella pompejana. 2001. Applied and Environmental Microbiology, 67:110-117.

Campbell BJ, and Hirsch VM. Vpr of simian immunodeficiency virus of African green monkeys is required for replication in macaque macrophages and lymphocytes. 1997. Journal of Virology, 71:5593-5602.

Hirsch V, Adger-Johnson D, Campbell B, Goldstein S, Brown C, Elkins WR, and Montefiori DC. A molecularly cloned, pathogenic, neutralization resistant simian immunodeficiency virus, SIVsmE543-3. 1997. Journal of Virology, 71:1608-1620.

Campbell BJ, and Avery RJ. Sequence analysis and transcriptional activity of the LTR of OLV-CU1, a North American ovine lentivirus. 1996. Journal of General Virology, 77:2999-3004.

Hirsch VM, Dapolito G, Goeken R, and Campbell BJ. Phylogeny and natural history of the primate lentiviruses, SIV and HIV. 1995. Current Opinion in Genetics & Development, 5:798-806.

Campbell BJ, and Hirsch VM. Extensive envelope heterogeneity of simian immunodeficiency virus in tissues from infected macaques. 1994. Journal of Virology, 68:3129-3137.

Campbell BJ, Thompson DR, Williams JR, Campbell SG, and Avery RJ. Characterization of a New York ovine lentivirus isolate. 1993. Journal of General Virology, 74:201-210.